CDS

Accession Number TCMCG017C01441
gbkey CDS
Protein Id OMP12931.1
Location join(113..480,561..1014)
GeneID InterPro:IPR000235
Organism Corchorus olitorius
locus_tag COLO4_02562

Protein

Length 273aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01005595.1
Definition Ribosomal protein S5/S7 [Corchorus olitorius]
Locus_tag COLO4_02562

EGGNOG-MAPPER Annotation

COG_category J
Description One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
KEGG_TC -
KEGG_Module M00178        [VIEW IN KEGG]
M00179        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE br01610        [VIEW IN KEGG]
ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03011        [VIEW IN KEGG]
KEGG_ko ko:K02992        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03010        [VIEW IN KEGG]
map03010        [VIEW IN KEGG]
GOs GO:0000028        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0003735        [VIEW IN EMBL-EBI]
GO:0005198        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005840        [VIEW IN EMBL-EBI]
GO:0006412        [VIEW IN EMBL-EBI]
GO:0006518        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0015935        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019843        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0022618        [VIEW IN EMBL-EBI]
GO:0022626        [VIEW IN EMBL-EBI]
GO:0022627        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042255        [VIEW IN EMBL-EBI]
GO:0042274        [VIEW IN EMBL-EBI]
GO:0043043        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044391        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044445        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0070925        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071826        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCCTACCGTAAACCAGCTGATCCGCAAGCCGCGTCAGGCACAGGTCAAGCGCAACAAGGTTCCGGCGCTGCAGCAGAACCCGCAGAAGCGCGGCGTTTGCACCCGCGTCTACACGACGACCCCGAAGAAGCCGAACTCGGCTCTGCGTAAGGTCGCCAAGATCCGCCTGACCAATGGCTTCGAAGTCATCGGCTACATTCCGGGCGAAGGTCACAACCTGCAGGAACACTCCGTCGTCATGATCCGTGGCGGCCGCGTAAAGGACTTGCCGGGCGTTCGCTACCACATCATCCGCGGCGTGCTCGACACCCAGGGTGTCAAGAACCGCAAGCAGCGCCGTTCCAAGTATGGCGCGAAGCGTCCGAATGCCGAAAAGCGTGAGATCAACCCGGACCCGAAGTTTGGTGATCTCGTTGTCACCAAGTTCATGAACGCCATCATGCTGCACGGCAAGAAGTCCGTTGCCGAAAACATCGTTTACGGTGCTTTCGATGCCGTTCAGGCCAAGCTGAAGCAGGAGCCGGTCGCGGTCTTCCATTCGGCTCTCGACAACATCGCTCCGCACGTCGAAGTCCGTTCGCGTCGCGTCGGCGGTGCCACCTACCAGGTCCCGGTCGATGTTCGTCCGGAGCGCCGTCAGGCTCTCGCCATCCGCTGGCTGATCGCCGCCGCTCGTAAGCGCAATGAAACAACCATGATCGATCGCCTCTGCGGCGAACTCATGGATGCCGCCAACAATCGCGGCTCTGCGGTGAAGAAGCGCGAAGACACCCACAAGATGGCCGACGCCAACCGTGCGTTCTCGCATTACCGCTGGTAA
Protein:  
MPTVNQLIRKPRQAQVKRNKVPALQQNPQKRGVCTRVYTTTPKKPNSALRKVAKIRLTNGFEVIGYIPGEGHNLQEHSVVMIRGGRVKDLPGVRYHIIRGVLDTQGVKNRKQRRSKYGAKRPNAEKREINPDPKFGDLVVTKFMNAIMLHGKKSVAENIVYGAFDAVQAKLKQEPVAVFHSALDNIAPHVEVRSRRVGGATYQVPVDVRPERRQALAIRWLIAAARKRNETTMIDRLCGELMDAANNRGSAVKKREDTHKMADANRAFSHYRW